STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Uchl3Ubiquitin carboxyl-terminal hydrolase. (231 aa)    
Predicted Functional Partners:
Ubc
Polyubiquitin-C.
    
 0.969
RpL40
Ubiquitin-60S ribosomal protein L40.
    
 0.938
Nedd8
NEDD8.
   
 0.880
Psmd14
26S proteasome non-ATPase regulatory subunit 14.
   
 0.860
UBA3
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.859
Gna13
Guanine nucleotide-binding protein subunit alpha-13.
    
 
 0.712
A0A2B4SV55
Guanine nucleotide-binding protein G(I) subunit alpha.
    
 
 0.712
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha.
    
 
 0.712
USP14
Ubiquitin carboxyl-terminal hydrolase 14.
   
  
 0.704
Psmb2
Proteasome subunit beta.
   
 
 0.682
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.