STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCHS1Protocadherin-16. (1006 aa)    
Predicted Functional Partners:
Dolk
Dolichol kinase.
      
 0.593
SETD4
SET domain-containing protein 4.
      
 0.563
A0A2B4S4W6
Catenin beta.
    
 0.555
med12
Mediator of RNA polymerase II transcription subunit 12.
      
 0.540
lhfpl2
Lipoma HMGIC fusion partner-like 2 protein.
    
 0.500
UCK2
Uridine-cytidine kinase 2.
    
 0.500
Myo9b
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.465
Fat4-3
Protocadherin Fat 4.
  
  
  0.461
Loxhd1
Lipoxygenase-likey domain-containing protein 1.
    
 0.456
CTNND2
Catenin delta-2.
    
 0.456
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.