STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA9Integrin alpha-9; Belongs to the integrin alpha chain family. (1186 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta-1.
   
 0.694
ITGB1-2
Integrin beta; Belongs to the integrin beta chain family.
   
 0.694
PXN
Paxillin.
    
 0.566
TLN1
Talin-1.
   
 0.546
Ptk2
Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.528
Vinc
Vinculin.
   
 0.522
SHC4
SHC-transforming protein 4.
    
 0.508
LanA-3
Laminin subunit alpha.
    
 0.502
USH2A-2
Usherin.
    
 0.502
LanB1
Laminin subunit beta-1.
    
 0.502
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.