STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pitx1Pituitary homeobox 1. (276 aa)    
Predicted Functional Partners:
hisD
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
      
 0.762
HIS4
Histidine biosynthesis trifunctional protein.
      
 0.762
BMP7
Bone morphogenetic protein 7.
      
 0.720
arkA
Ankyrin repeat-containing protein kinase A.
      
 0.594
zmcm6-b
DNA helicase; Belongs to the MCM family.
      
 0.557
Irx4
Iroquois-class homeodomain protein IRX-4.
      
 0.522
ACAC
Acetyl-CoA carboxylase.
      
 0.519
Ebf3
Transcription factor COE3.
   
  
 0.467
pan
Protein pangolin, isoforms A/H/I/S.
    
 
 0.464
TBX3
T-box transcription factor TBX3.
   
 
 0.448
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.