STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB24Ras-related protein Rab-24. (205 aa)    
Predicted Functional Partners:
Rabgef1
Rab5 GDP/GTP exchange factor.
   
 0.961
Gak
Cyclin-G-associated kinase.
   
 0.961
Zfyve20
Rabenosyn-5.
   
 0.651
pep7
Vacuolar segregation protein pep7.
   
 0.651
Zfand4
AN1-type zinc finger protein 4.
   
 0.623
Gdi1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.615
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.615
VPS8
Vacuolar protein sorting-associated protein 8-like.
    
 
 0.608
RABEP1
Rab GTPase-binding effector protein 1.
    
 0.591
ANKFY1
Ankyrin repeat and FYVE domain-containing protein 1.
    
 0.588
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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