Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CALR | ITPR1 | A0A2B4SGP5 | A0A2B4T0S0 | Calreticulin. | Inositol 1,4,5-trisphosphate receptor type 1. | 0.736 |
CALR | STIM1 | A0A2B4SGP5 | A0A2B4RZQ0 | Calreticulin. | Stromal interaction molecule 1. | 0.674 |
Calr | ITPR1 | A0A2B4R4E2 | A0A2B4T0S0 | Calreticulin. | Inositol 1,4,5-trisphosphate receptor type 1. | 0.736 |
Calr | STIM1 | A0A2B4R4E2 | A0A2B4RZQ0 | Calreticulin. | Stromal interaction molecule 1. | 0.674 |
ITPR1 | CALR | A0A2B4T0S0 | A0A2B4SGP5 | Inositol 1,4,5-trisphosphate receptor type 1. | Calreticulin. | 0.736 |
ITPR1 | Calr | A0A2B4T0S0 | A0A2B4R4E2 | Inositol 1,4,5-trisphosphate receptor type 1. | Calreticulin. | 0.736 |
ITPR1 | STIM1 | A0A2B4T0S0 | A0A2B4RZQ0 | Inositol 1,4,5-trisphosphate receptor type 1. | Stromal interaction molecule 1. | 0.960 |
ITPR1 | orai1 | A0A2B4T0S0 | A0A2B4SSM2 | Inositol 1,4,5-trisphosphate receptor type 1. | Calcium release-activated calcium channel protein 1. | 0.734 |
JPH2 | STIM1 | A0A2B4RYW5 | A0A2B4RZQ0 | Junctophilin-2. | Stromal interaction molecule 1. | 0.585 |
Nfat5 | STIM1 | A0A2B4S1D0 | A0A2B4RZQ0 | Nuclear factor of activated T-cells 5. | Stromal interaction molecule 1. | 0.581 |
Nfat5 | orai1 | A0A2B4S1D0 | A0A2B4SSM2 | Nuclear factor of activated T-cells 5. | Calcium release-activated calcium channel protein 1. | 0.573 |
STIM1 | CALR | A0A2B4RZQ0 | A0A2B4SGP5 | Stromal interaction molecule 1. | Calreticulin. | 0.674 |
STIM1 | Calr | A0A2B4RZQ0 | A0A2B4R4E2 | Stromal interaction molecule 1. | Calreticulin. | 0.674 |
STIM1 | ITPR1 | A0A2B4RZQ0 | A0A2B4T0S0 | Stromal interaction molecule 1. | Inositol 1,4,5-trisphosphate receptor type 1. | 0.960 |
STIM1 | JPH2 | A0A2B4RZQ0 | A0A2B4RYW5 | Stromal interaction molecule 1. | Junctophilin-2. | 0.585 |
STIM1 | Nfat5 | A0A2B4RZQ0 | A0A2B4S1D0 | Stromal interaction molecule 1. | Nuclear factor of activated T-cells 5. | 0.581 |
STIM1 | Sgk223 | A0A2B4RZQ0 | A0A2B4R9H9 | Stromal interaction molecule 1. | Tyrosine-protein kinase. | 0.530 |
STIM1 | TBK1 | A0A2B4RZQ0 | A0A2B4SKC0 | Stromal interaction molecule 1. | Serine/threonine-protein kinase TBK1. | 0.547 |
STIM1 | TRPC5-4 | A0A2B4RZQ0 | A0A2B4S7X7 | Stromal interaction molecule 1. | Short transient receptor potential channel 5; Belongs to the transient receptor (TC 1.A.4) family. | 0.520 |
STIM1 | dlx4a | A0A2B4RZQ0 | A0A2B4S827 | Stromal interaction molecule 1. | Homeobox protein Dlx4a. | 0.516 |
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