STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2B4S055Carb-bd_dom_fam9 domain-containing protein. (374 aa)    
Predicted Functional Partners:
MDC1
Mediator of DNA damage checkpoint protein 1.
      
 0.519
Atxn7
Ataxin-7.
      
 0.519
Atxn3
Ataxin-3.
      
 0.518
RUNX1
Runt-related transcription factor 1.
      
 0.515
TBP
TATA-box-binding protein.
      
 0.514
PIK3R1
Phosphatidylinositol 3-kinase regulatory subunit alpha.
     
 0.451
DIO3-2
Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine).
      
 0.416
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.