Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V-SEA | ZMYM1-13 | A0A2B4S2L3 | A0A2B4S1M9 | Tyrosine-protein kinase transforming protein SEA. | Zinc finger MYM-type protein 1. | 0.529 |
V-SEA | unc-89 | A0A2B4S2L3 | A0A2B4R2Y3 | Tyrosine-protein kinase transforming protein SEA. | Muscle M-line assembly protein unc-89. | 0.650 |
ZMYM1-13 | V-SEA | A0A2B4S1M9 | A0A2B4S2L3 | Zinc finger MYM-type protein 1. | Tyrosine-protein kinase transforming protein SEA. | 0.529 |
ZMYM1-13 | unc-89 | A0A2B4S1M9 | A0A2B4R2Y3 | Zinc finger MYM-type protein 1. | Muscle M-line assembly protein unc-89. | 0.467 |
unc-89 | V-SEA | A0A2B4R2Y3 | A0A2B4S2L3 | Muscle M-line assembly protein unc-89. | Tyrosine-protein kinase transforming protein SEA. | 0.650 |
unc-89 | ZMYM1-13 | A0A2B4R2Y3 | A0A2B4S1M9 | Muscle M-line assembly protein unc-89. | Zinc finger MYM-type protein 1. | 0.467 |