STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap1gds1-bRap1 GTPase-GDP dissociation stimulator 1-B. (680 aa)    
Predicted Functional Partners:
TTC18
Tetratricopeptide repeat protein 18.
    
 0.605
rhot1a
Mitochondrial Rho GTPase 1-A.
    
 0.605
Zfp36l1
Zinc finger protein 36, C3H1 type-like 1.
    
 
 0.590
Rhoa
Transforming protein RhoA.
    
 0.574
Rhoa-2
Transforming protein RhoA.
    
 0.574
RHO
Ras-like GTP-binding protein RHO.
    
 0.574
RHO-2
Ras-like GTP-binding protein RHO.
    
 0.574
DENND4A
C-myc promoter-binding protein.
      
 0.559
Ttc23l
Tetratricopeptide repeat protein 23-like.
      
 0.523
stpg2
Sperm-tail PG-rich repeat-containing protein 2.
      
 0.523
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.