STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HARSHistidine--tRNA ligase, cytoplasmic. (514 aa)    
Predicted Functional Partners:
hisD
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
    
 0.894
HIS4
Histidine biosynthesis trifunctional protein.
    
 0.894
YARS
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.876
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.845
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.812
aspS
Aspartate--tRNA(Asp/Asn) ligase.
  
  
 0.703
Vars
Valine--tRNA ligase.
  
 
 0.676
lysS
Lysine--tRNA ligase.
  
 
 0.665
CARS
Cysteine--tRNA ligase, cytoplasmic.
   
  
 0.647
Sars
Serine--tRNA ligase, cytoplasmic.
  
 
 0.644
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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