STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatad1GATA zinc finger domain-containing protein 1. (228 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
    
 
 0.866
A0A2B4RSU5
Mortality factor 4-like protein 1.
    
 
 0.731
emsy
Protein EMSY.
    
 
 0.624
Arid4b
AT-rich interactive domain-containing protein 4B.
    
 
 0.610
Sin3a
Paired amphipathic helix protein Sin3a.
    
 
 0.542
rbbp7
Histone-binding protein RBBP7.
    
   0.540
MSL3
Male-specific lethal 3-like.
    
 
 0.440
Mrgbp
MRG/MORF4L-binding protein.
    
 
 0.420
TMEM101
Transmembrane protein 101.
      
 0.418
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
Server load: low (26%) [HD]