STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oit3-6Oncoprotein-induced transcript 3 protein. (1486 aa)    
Predicted Functional Partners:
roco5
Putative serine/threonine-protein kinase roco5.
   
  0.461
mshA
D-inositol 3-phosphate glycosyltransferase.
   
  0.461
pats1
Putative serine/threonine-protein kinase pats1.
   
  0.461
pats1-3
Putative serine/threonine-protein kinase pats1.
   
  0.461
A0A2B4RJU4
OTU domain-containing protein.
   
  0.461
pats1-14
Putative serine/threonine-protein kinase pats1.
   
  0.461
A0A2B4RWT0
Uncharacterized protein.
   
  0.461
gbpC
Cyclic GMP-binding protein C.
   
  0.461
pats1-24
Putative serine/threonine-protein kinase pats1.
   
  0.461
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
  0.461
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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