STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celf4CUGBP Elav-like family member 4. (500 aa)    
Predicted Functional Partners:
A0A2B4SML3
Uncharacterized protein.
      
 0.575
mbnl2a
Muscleblind-like protein 2a.
   
 
 0.500
Rbfox3
RNA binding protein fox-1-like 3.
  
 
 0.485
RBM38-2
RNA-binding protein 38.
  
   
 0.482
U2surp
U2 snRNP-associated SURP motif-containing protein.
      
 0.461
SRSF2
Serine/arginine-rich splicing factor 2.
  
   
 0.449
SRSF1
Serine/arginine-rich splicing factor 1.
  
  
 0.434
bicc1-b
Protein bicaudal C-like 1-B.
   
 
 0.430
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1.
      
 0.420
TARDBP
TAR DNA-binding protein 43.
   
 
 0.412
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.