Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rbm25 | SF1 | A0A2B4SUE1 | A0A2B4SHZ5 | RNA-binding protein 25. | Splicing factor 1. | 0.867 |
Rbm25 | SF3A2 | A0A2B4SUE1 | A0A2B4SVV9 | RNA-binding protein 25. | Splicing factor 3A subunit 2. | 0.733 |
Rbm25 | Sf3a3 | A0A2B4SUE1 | A0A2B4RSW0 | RNA-binding protein 25. | Splicing factor 3A subunit 3. | 0.621 |
Rbm25 | Srrm2 | A0A2B4SUE1 | A0A2B4S6W1 | RNA-binding protein 25. | Serine/arginine repetitive matrix protein 2. | 0.836 |
Rbm25 | TRNAU1AP | A0A2B4SUE1 | A0A2B4RPC3 | RNA-binding protein 25. | tRNA selenocysteine 1-associated protein 1. | 0.906 |
Rbm25 | U2AF2 | A0A2B4SUE1 | A0A2B4RGN2 | RNA-binding protein 25. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.977 |
Rbm25 | ddx46 | A0A2B4SUE1 | A0A2B4SN38 | RNA-binding protein 25. | Putative ATP-dependent RNA helicase DDX46. | 0.937 |
Rbm25 | sf3b1 | A0A2B4SUE1 | A0A2B4SGD7 | RNA-binding protein 25. | Splicing factor 3B subunit 1. | 0.892 |
SF1 | Rbm25 | A0A2B4SHZ5 | A0A2B4SUE1 | Splicing factor 1. | RNA-binding protein 25. | 0.867 |
SF1 | SF3A2 | A0A2B4SHZ5 | A0A2B4SVV9 | Splicing factor 1. | Splicing factor 3A subunit 2. | 0.984 |
SF1 | Sf3a3 | A0A2B4SHZ5 | A0A2B4RSW0 | Splicing factor 1. | Splicing factor 3A subunit 3. | 0.973 |
SF1 | Srrm2 | A0A2B4SHZ5 | A0A2B4S6W1 | Splicing factor 1. | Serine/arginine repetitive matrix protein 2. | 0.800 |
SF1 | TRNAU1AP | A0A2B4SHZ5 | A0A2B4RPC3 | Splicing factor 1. | tRNA selenocysteine 1-associated protein 1. | 0.856 |
SF1 | U2AF2 | A0A2B4SHZ5 | A0A2B4RGN2 | Splicing factor 1. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.994 |
SF1 | U2af1l4 | A0A2B4SHZ5 | A0A2B4S8T3 | Splicing factor 1. | Splicing factor U2AF 26 kDa subunit. | 0.808 |
SF1 | cdc5l | A0A2B4SHZ5 | A0A2B4SRR1 | Splicing factor 1. | Cell division cycle 5-related protein. | 0.968 |
SF1 | ddx46 | A0A2B4SHZ5 | A0A2B4SN38 | Splicing factor 1. | Putative ATP-dependent RNA helicase DDX46. | 0.976 |
SF1 | sf3b1 | A0A2B4SHZ5 | A0A2B4SGD7 | Splicing factor 1. | Splicing factor 3B subunit 1. | 0.843 |
SF3A2 | Rbm25 | A0A2B4SVV9 | A0A2B4SUE1 | Splicing factor 3A subunit 2. | RNA-binding protein 25. | 0.733 |
SF3A2 | SF1 | A0A2B4SVV9 | A0A2B4SHZ5 | Splicing factor 3A subunit 2. | Splicing factor 1. | 0.984 |
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