STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIMC1SUMO-interacting motif-containing protein 1. (603 aa)    
Predicted Functional Partners:
Unc79
Protein unc-79-like.
    
 0.769
Fam178a
Protein FAM178A.
    
   0.611
Ranbp2
E3 SUMO-protein ligase RanBP2.
    
 0.549
RANBP2
E3 SUMO-protein ligase RanBP2.
    
 0.549
Kdm6a
Lysine-specific demethylase 6A.
    
 0.493
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.465
roco5
Putative serine/threonine-protein kinase roco5.
    
 0.432
mshA
D-inositol 3-phosphate glycosyltransferase.
    
 0.432
pats1
Putative serine/threonine-protein kinase pats1.
    
 0.432
pats1-3
Putative serine/threonine-protein kinase pats1.
    
 0.432
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.