STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (442 aa)    
Predicted Functional Partners:
Rab1A
NAD(P)(+)--arginine ADP-ribosyltransferase.
   
 0.953
Rabgef1
Rab5 GDP/GTP exchange factor.
     
 0.944
Rab6
Ras-related protein Rab6.
   
 0.907
RAB5B
Ras-related protein Rab-5B.
   
 0.854
RAB36
Ras-related protein Rab-36.
   
 0.830
Armc5
Armadillo repeat-containing protein 5.
    
 0.825
RAB9A-2
Ras-related protein Rab-9A.
    
 0.825
Rab35
Ras-related protein Rab-35.
    
 0.775
Rab11a
Ras-related protein Rab-11A.
   
 0.774
Rab11a-2
Ras-related protein Rab-11A.
   
 0.774
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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