STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUMO1Small ubiquitin-related modifier. (91 aa)    
Predicted Functional Partners:
ube2ia
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 0.999
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.996
uba2
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.994
sae1
SUMO-activating enzyme subunit 1.
   
 0.987
ube2ia-2
SUMO-conjugating enzyme UBC9-A.
   
 0.985
SENP1
Sentrin-specific protease 1.
    
 0.974
Rangap1
Ran GTPase-activating protein 1.
    
 0.950
LGR5
Leucine-rich repeat-containing G-protein coupled receptor 5.
    
 0.950
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.943
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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