STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc18a2Synaptic vesicular amine transporter. (467 aa)    
Predicted Functional Partners:
Rims2
Regulating synaptic membrane exocytosis protein 2.
     
 0.758
Syt1
Synaptotagmin 1.
     
 0.747
VAMP3
Vesicle-associated membrane protein 3.
   
 
 0.735
Rab3
Ras-related protein Rab-3.
     
 0.722
STX1B
Syntaxin-1B; Belongs to the syntaxin family.
     
 0.713
Unc13b
Protein unc-13-like B.
     
 0.682
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.669
Snap25
Synaptosomal-associated protein.
     
 0.664
PPFIA1
Liprin-alpha-1.
     
 0.641
Cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
     
 0.633
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.