STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ScmPolycomb protein Scm. (988 aa)    
Predicted Functional Partners:
rnf2
E3 ubiquitin-protein ligase RING2.
    
 0.853
Su(var)205-2
Heterochromatin protein 1.
    
 0.826
Yaf2
YY1-associated factor 2.
    
 0.824
PcgF3
Polycomb group RING finger protein 3.
    
 0.811
TFDP1
Transcription factor Dp-1.
   
 0.724
MAX
Protein max.
    
 0.679
Ezh2
Histone-lysine N-methyltransferase EZH2.
   
 0.661
SCMH1
Polycomb protein SCMH1.
    
 
0.610
suz12
Polycomb protein suz12.
   
 0.587
Jazf1
Juxtaposed with another zinc finger protein 1.
    
 
 0.583
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.