STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD109CD109 antigen. (1499 aa)    
Predicted Functional Partners:
CBX2
Chromobox protein-like 2.
    
 0.757
rnf2
E3 ubiquitin-protein ligase RING2.
    
 0.732
SCMH1
Polycomb protein SCMH1.
    
 0.677
bmi1b
Polycomb complex protein BMI-1-B.
    
 0.554
bmi1a
Polycomb complex protein BMI-1-A.
    
 0.554
BMI1
Polycomb complex protein BMI-1.
    
 0.554
bmi1a-2
Polycomb complex protein BMI-1-A.
    
 0.554
eed-a
Polycomb protein eed-A.
    
 0.512
cec-1
Chromo domain-containing protein cec-1.
    
 0.491
NPTX1
Neuronal pentraxin-1.
    
 0.478
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.