STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH1CHarmonin. (422 aa)    
Predicted Functional Partners:
Ush1g
Usher syndrome type-1G protein-like.
    
 0.958
Arid4b
AT-rich interactive domain-containing protein 4B.
    
 
 0.730
Gpr98
G-protein coupled receptor 98; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.721
Irx4
Iroquois-class homeodomain protein IRX-4.
   
  
 0.684
DFNB31-2
Whirlin.
      
0.644
TET2
Methylcytosine dioxygenase TET2.
      
 0.640
Ift88
Intraflagellar transport protein 88-like.
    
 0.630
MYO15A
Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.625
ck
Myosin-VIIa.
   
 0.625
Myo7a
Unconventional myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.625
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.