STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmfbp1Polyamine-modulated factor 1-binding protein 1. (2283 aa)    
Predicted Functional Partners:
Elmod2
ELMO domain-containing protein 2.
      
 0.526
PMF1
Polyamine-modulated factor 1.
      
 0.516
A0A2B4SSX9
Uncharacterized protein.
  
     0.459
roco5
Putative serine/threonine-protein kinase roco5.
    
 0.437
mshA
D-inositol 3-phosphate glycosyltransferase.
    
 0.437
pats1
Putative serine/threonine-protein kinase pats1.
    
 0.437
pats1-3
Putative serine/threonine-protein kinase pats1.
    
 0.437
A0A2B4RJU4
OTU domain-containing protein.
    
 0.437
pats1-14
Putative serine/threonine-protein kinase pats1.
    
 0.437
A0A2B4RWT0
Uncharacterized protein.
    
 0.437
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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