Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARNT | Otp | A0A2B4RJY9 | A0A2B4STF3 | Aryl hydrocarbon receptor nuclear translocator. | Homeobox protein orthopedia. | 0.512 |
Atoh8 | COPZ1 | A0A2B4RN84 | A0A2B4RWM1 | Protein atonal-like 8. | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | 0.457 |
Atoh8 | Otp | A0A2B4RN84 | A0A2B4STF3 | Protein atonal-like 8. | Homeobox protein orthopedia. | 0.406 |
COPZ1 | Atoh8 | A0A2B4RWM1 | A0A2B4RN84 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Protein atonal-like 8. | 0.457 |
COPZ1 | Otp | A0A2B4RWM1 | A0A2B4STF3 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Homeobox protein orthopedia. | 0.529 |
Otp | ARNT | A0A2B4STF3 | A0A2B4RJY9 | Homeobox protein orthopedia. | Aryl hydrocarbon receptor nuclear translocator. | 0.512 |
Otp | Atoh8 | A0A2B4STF3 | A0A2B4RN84 | Homeobox protein orthopedia. | Protein atonal-like 8. | 0.406 |
Otp | COPZ1 | A0A2B4STF3 | A0A2B4RWM1 | Homeobox protein orthopedia. | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | 0.529 |
Otp | PXN | A0A2B4STF3 | A0A2B4RPJ7 | Homeobox protein orthopedia. | Paxillin. | 0.494 |
Otp | Pax6 | A0A2B4STF3 | A0A2B4RRA4 | Homeobox protein orthopedia. | Paired box protein Pax-6. | 0.464 |
Otp | SIX6 | A0A2B4STF3 | A0A2B4S9U6 | Homeobox protein orthopedia. | Homeobox protein SIX6. | 0.428 |
Otp | Spdef | A0A2B4STF3 | A0A2B4SI57 | Homeobox protein orthopedia. | SAM pointed domain-containing Ets transcription factor. | 0.418 |
Otp | Tgfbi | A0A2B4STF3 | A0A2B4RYK1 | Homeobox protein orthopedia. | Transforming growth factor-beta-induced protein ig-h3. | 0.410 |
PXN | Otp | A0A2B4RPJ7 | A0A2B4STF3 | Paxillin. | Homeobox protein orthopedia. | 0.494 |
Pax6 | Otp | A0A2B4RRA4 | A0A2B4STF3 | Paired box protein Pax-6. | Homeobox protein orthopedia. | 0.464 |
Pax6 | SIX6 | A0A2B4RRA4 | A0A2B4S9U6 | Paired box protein Pax-6. | Homeobox protein SIX6. | 0.543 |
Pax6 | Spdef | A0A2B4RRA4 | A0A2B4SI57 | Paired box protein Pax-6. | SAM pointed domain-containing Ets transcription factor. | 0.481 |
SIX6 | Otp | A0A2B4S9U6 | A0A2B4STF3 | Homeobox protein SIX6. | Homeobox protein orthopedia. | 0.428 |
SIX6 | Pax6 | A0A2B4S9U6 | A0A2B4RRA4 | Homeobox protein SIX6. | Paired box protein Pax-6. | 0.543 |
Spdef | Otp | A0A2B4SI57 | A0A2B4STF3 | SAM pointed domain-containing Ets transcription factor. | Homeobox protein orthopedia. | 0.418 |
page 1 of 2