STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Uri1Unconventional prefoldin RPB5 interactor. (400 aa)    
Predicted Functional Partners:
Polr2e
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 
 0.888
PFDN2
Prefoldin subunit 2.
    
 
 0.877
Pfdn6
Prefoldin subunit 6.
    
 
 0.870
ruvbl1
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.783
ruvbl2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.723
Pdrg1
P53 and DNA damage-regulated protein 1.
    
 
 0.677
pih1d1
PIH1 domain-containing protein 1.
    
 
 0.677
PFDN4
Prefoldin subunit 4.
    
 
 0.641
RPAP3
RNA polymerase II-associated protein 3.
    
 
 0.590
Rpap3
RNA polymerase II-associated protein 3.
    
 
 0.590
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.