STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APLP1Amyloid-like protein 1. (584 aa)    
Predicted Functional Partners:
unc-89
Muscle M-line assembly protein unc-89.
    
 0.934
APBA1
Amyloid beta A4 protein-binding family A member 1.
   
 
 0.856
SORL1
Sortilin-related receptor.
    
 0.804
SORL1-2
Sortilin-related receptor.
    
 0.804
Sorl1
Sortilin-related receptor.
    
 0.804
psen2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.779
trip12
E3 ubiquitin-protein ligase TRIP12.
      
 0.762
NCSTN
Nicastrin.
    
 0.734
Trio
Triple functional domain protein.
     
 0.701
Kalrn
Kalirin.
     
 0.701
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.