STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pax6aPaired box protein Pax-6. (561 aa)    
Predicted Functional Partners:
cactin
Cactin.
    
 0.689
Timm22
Mitochondrial import inner membrane translocase subunit Tim22.
    
 0.689
TIMM9
Mitochondrial import inner membrane translocase subunit Tim9.
   
 
 0.678
Timm10
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.607
Sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.521
SDHC
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial.
    
 
 0.466
Sphk1
Sphingosine kinase 1.
     
 0.436
timm10b
Mitochondrial import inner membrane translocase subunit Tim10 B.
   
 
 0.431
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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