STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN10Ataxin-10. (629 aa)    
Predicted Functional Partners:
TNPO1
Transportin-1.
   
  
 0.603
dnaaf3
Dynein assembly factor 3, axonemal.
      
 0.560
Slc18a2
Synaptic vesicular amine transporter.
      
 0.517
pol-9
RNA-directed DNA polymerase from mobile element jockey.
  
     0.499
A0A2B4SFV8
Reverse transcriptase domain-containing protein.
  
     0.491
Iqcb1
IQ calmodulin-binding motif-containing protein 1.
    
 
 0.478
pol-211
RNA-directed DNA polymerase from mobile element jockey.
  
     0.477
A0A2B4S397
Putative RNA-directed DNA polymerase from transposon X-element.
  
     0.466
A0A2B4SA00
Reverse transcriptase domain-containing protein.
  
     0.450
A0A2B4SBN0
Protein C8orf37-like.
      
 0.437
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.