STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0025PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_0012 major facilitator transporter. (445 aa)    
Predicted Functional Partners:
Slin_0024
PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pha:PSHAa2614 potassium channel protein.
     
 0.562
Slin_2965
KEGG: tcx:Tcr_2155 hypothetical protein.
  
     0.531
Slin_0758
KEGG: bid:Bind_0502 hypothetical protein.
  
     0.458
Slin_3439
PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ilo:IL2392 secreted protein containing HslJ- like protein.
  
     0.439
Slin_0214
Hypothetical protein; KEGG: lhk:LHK_01290 DUF2029 domain containing protein.
  
     0.434
Slin_5412
KEGG: ade:Adeh_2330 hypothetical protein.
  
     0.433
Slin_2691
PFAM: secretion protein HlyD family protein; KEGG: pfl:PFL_4126 HlyD family secretion protein.
  
   0.410
Slin_0354
Hypothetical protein.
  
    0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.