STRINGSTRING
Slin_0051 protein (Spirosoma linguale) - STRING interaction network
"Slin_0051" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0051Hypothetical protein (151 aa)    
Predicted Functional Partners:
Slin_0052
Hypothetical protein (82 aa)
 
          0.967
Slin_1327
Hypothetical protein (223 aa)
   
          0.692
Slin_3434
Hypothetical protein (78 aa)
 
          0.634
Slin_2565
Hypothetical protein (194 aa)
   
          0.623
Slin_4513
Hypothetical protein (78 aa)
 
          0.597
Slin_6219
PilT protein domain-containing protein (129 aa)
   
          0.593
Slin_5910
Hypothetical protein (77 aa)
 
          0.573
Slin_0341
Hypothetical protein (192 aa)
   
          0.569
Slin_0414
Hypothetical protein (203 aa)
   
          0.552
Slin_1596
Hypothetical protein (194 aa)
   
          0.551
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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