STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0051KEGG: scl:sce5012 hypothetical protein. (151 aa)    
Predicted Functional Partners:
Slin_0052
PFAM: protein of unknown function UPF0175; KEGG: scl:sce5011 hypothetical protein.
 
     0.949
Slin_1012
PFAM: protein of unknown function UPF0175; KEGG: scl:sce5011 hypothetical protein.
 
     0.782
Slin_1154
PFAM: protein of unknown function DUF433; KEGG: rpe:RPE_2627 protein of unknown function DUF433.
  
     0.691
Slin_3433
KEGG: rpt:Rpal_0895 hypothetical protein.
  
     0.608
Slin_4513
PFAM: protein of unknown function DUF433; KEGG: afr:AFE_1367 hypothetical protein.
  
     0.598
Slin_3434
PFAM: protein of unknown function DUF433; KEGG: lch:Lcho_4191 hypothetical protein.
  
     0.577
Slin_5531
PFAM: protein of unknown function DUF433; KEGG: rpc:RPC_2761 hypothetical protein.
  
     0.557
Slin_4512
KEGG: afr:AFE_1368 hypothetical protein.
  
     0.548
Slin_5910
PFAM: protein of unknown function DUF433; KEGG: rpe:RPE_2627 protein of unknown function DUF433.
  
     0.545
Slin_2417
KEGG: amc:MADE_00608 hypothetical protein.
  
     0.536
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.