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Slin_0057 protein (Spirosoma linguale) - STRING interaction network
"Slin_0057" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0057Hypothetical protein (341 aa)    
Predicted Functional Partners:
Slin_0056
Hypothetical protein (157 aa)
              0.859
Slin_3408
ATP-dependent endonuclease (363 aa)
 
     
  0.821
Slin_1691
SMC domain-containing protein (378 aa)
 
     
  0.794
Slin_2916
Hypothetical protein (347 aa)
   
          0.639
Slin_6340
SMC domain-containing protein (420 aa)
   
          0.586
Slin_0239
XisI protein (115 aa)
   
          0.585
Slin_1545
XisH protein (138 aa)
   
          0.582
Slin_0238
XisH protein (138 aa)
   
          0.579
Slin_1546
XisI protein (115 aa)
   
          0.566
Slin_0058
Glycoside hydrolase (693 aa)
              0.529
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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