STRINGSTRING
Slin_0067 protein (Spirosoma linguale) - STRING interaction network
"Slin_0067" - Osmosensitive K channel His kinase sensor in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0067Osmosensitive K channel His kinase sensor (374 aa)    
Predicted Functional Partners:
kdpC
Potassium ABC transporter Atpase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex (202 aa)
 
   
  0.964
Slin_0068
PAS/PAC sensor signal transduction histidine kinase (604 aa)
   
  0.958
kdpB
K+-transporting ATPase subunit beta; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system (719 aa)
 
   
  0.947
kdpA
Potassium-transporting ATPase subunit alpha; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane (573 aa)
 
   
  0.923
Slin_0512
Histidine kinase (303 aa)
 
 
   
  0.872
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (439 aa)
       
      0.763
Slin_5610
Histidine kinase (344 aa)
 
 
   
  0.744
Slin_0069
Crp/FNR family transcriptional regulator (277 aa)
              0.715
Slin_0066
Hypothetical protein (371 aa)
              0.692
Slin_0070
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (318 aa)
              0.691
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]