STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0129Hypothetical protein. (211 aa)    
Predicted Functional Partners:
Slin_0118
PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein.
  
     0.771
Slin_0760
PFAM: Protein of unknown function DUF2383; KEGG: dac:Daci_5865 hypothetical protein.
  
     0.705
Slin_6235
PFAM: Protein of unknown function DUF2383; KEGG: ppu:PP_0797 hypothetical protein.
  
     0.578
Slin_6298
KEGG: tgr:Tgr7_2098 hypothetical protein.
  
     0.572
Slin_4190
KEGG: pag:PLES_23961 hypothetical protein.
 
     0.554
Slin_5308
Hypothetical protein.
  
     0.508
Slin_0749
KEGG: sat:SYN_01303 hypothetical protein.
  
     0.503
Slin_1509
Hypothetical protein.
  
     0.487
Slin_0130
PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: hypothetical protein.
       0.469
Slin_1176
Hypothetical protein.
 
    0.467
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.