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Slin_0129 protein (Spirosoma linguale) - STRING interaction network
"Slin_0129" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0129Hypothetical protein (211 aa)    
Predicted Functional Partners:
Slin_0118
GH3 auxin-responsive promoter (508 aa)
   
          0.777
Slin_6611
TonB-dependent receptor plug (1137 aa)
   
          0.690
Slin_6612
Hypothetical protein (546 aa)
   
          0.664
Slin_4960
Hypothetical protein (296 aa)
   
          0.655
Slin_0089
Hypothetical protein (223 aa)
   
          0.645
Slin_2813
Metal dependent phosphohydrolase (414 aa)
   
          0.642
Slin_5308
Hypothetical protein (326 aa)
   
          0.589
Slin_2866
Hypothetical protein (277 aa)
   
          0.568
Slin_3997
Hypothetical protein (486 aa)
   
          0.560
Slin_3188
Short-chain dehydrogenase/reductase SDR (265 aa)
   
          0.549
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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