STRINGSTRING
Slin_0149 protein (Spirosoma linguale) - STRING interaction network
"Slin_0149" - Sarcosine oxidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0149Sarcosine oxidase (385 aa)    
Predicted Functional Partners:
Slin_1729
Threonine aldolase (343 aa)
 
 
    0.924
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (967 aa)
     
 
  0.912
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (428 aa)
     
 
  0.904
Slin_3535
Glycine C-acetyltransferase (434 aa)
     
 
    0.901
Slin_0150
Hypothetical protein (822 aa)
              0.810
Slin_2266
Alanine racemase (835 aa)
   
   
  0.711
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
 
  0.693
Slin_0151
Hypothetical protein (245 aa)
              0.560
Slin_6576
UBA/THIF-type NAD/FAD binding protein (348 aa)
   
   
  0.532
Slin_3463
UBA/THIF-type NAD/FAD binding protein (379 aa)
   
   
  0.532
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]