STRINGSTRING
Slin_0152 protein (Spirosoma linguale) - STRING interaction network
"Slin_0152" - Sugar permease in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0152Sugar permease (335 aa)    
Predicted Functional Partners:
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
   
          0.747
Slin_2649
Ribokinase (319 aa)
   
          0.732
Slin_2121
Hypothetical protein (1837 aa)
   
          0.603
Slin_6449
Hypothetical protein (857 aa)
   
          0.594
Slin_5049
Inosine/uridine-preferring nucleoside hydrolase (333 aa)
   
          0.572
Slin_6430
alpha-L-rhamnosidase (757 aa)
   
          0.513
Slin_4054
Cold-shock DNA-binding domain-containing protein (148 aa)
   
          0.509
Slin_1945
alpha-L-rhamnosidase (819 aa)
   
          0.478
Slin_3860
O-antigen polymerase (494 aa)
   
          0.474
Slin_4581
Hypothetical protein (494 aa)
   
          0.454
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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