STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0210PFAM: K channel inward rectifier conserved region 2 domain protein; Ion transport 2 domain protein; KEGG: bph:Bphy_0145 K+ channel inward rectifier domain-containing protein. (330 aa)    
Predicted Functional Partners:
Slin_0209
PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ade:Adeh_3395 peptidase S66, LD- carboxypeptidase A.
       0.584
Slin_0208
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: abo:ABO_1265 oxidoreductase.
       0.570
Slin_0211
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
       0.541
Slin_4917
PFAM: band 7 protein; SMART: band 7 protein; KEGG: afw:Anae109_4200 band 7 protein.
  
     0.515
Slin_1546
PFAM: XisI protein.
  
     0.424
Slin_0213
KEGG: eba:ebA4258 polysaccharide deacetylase.
 
     0.423
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.