STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0216PFAM: protein of unknown function DUF721; KEGG: geo:Geob_1482 protein of unknown function DUF721. (108 aa)    
Predicted Functional Partners:
Slin_4489
Hypothetical protein.
  
     0.649
Slin_5927
Hypothetical protein.
  
     0.649
Slin_4754
KEGG: hypothetical protein.
  
     0.612
Slin_0248
KEGG: wsu:WS2183 hypothetical protein.
  
     0.583
Slin_5969
TIGRFAM: gliding motility-associated lipoprotein GldH.
 
     0.515
Slin_1160
Hypothetical protein.
  
     0.506
Slin_5539
Hypothetical protein.
  
     0.506
Slin_4080
PFAM: glycosyl transferase family 2; KEGG: hch:HCH_05591 N-glycosyltransferase PgaC.
  
     0.504
Slin_2995
Hypothetical protein.
  
     0.484
Slin_5634
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dds:Ddes_0388 tol-pal system protein YbgF.
 
     0.479
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.