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Slin_0221 protein (Spirosoma linguale) - STRING interaction network
"Slin_0221" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0221Hypothetical protein (484 aa)    
Predicted Functional Partners:
Slin_3257
Hypothetical protein (185 aa)
   
          0.760
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
   
          0.755
Slin_1746
Hypothetical protein (191 aa)
   
          0.726
Slin_2852
Hypothetical protein (759 aa)
   
          0.698
Slin_2396
Hypothetical protein (247 aa)
   
          0.656
Slin_0222
Amine oxidase (402 aa)
              0.653
Slin_5096
Hypothetical protein (989 aa)
   
          0.645
Slin_3438
Late embryogenesis abundant protein 2 (304 aa)
   
          0.645
Slin_5832
Hypothetical protein (102 aa)
   
          0.616
Slin_5231
Hypothetical protein (343 aa)
   
          0.613
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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