STRINGSTRING
Slin_0235 protein (Spirosoma linguale) - STRING interaction network
"Slin_0235" - malate/L-lactate dehydrogenase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0235malate/L-lactate dehydrogenase (355 aa)    
Predicted Functional Partners:
Slin_4063
Pyruvate kinase (488 aa)
     
 
  0.911
Slin_5036
Citrate synthase I (428 aa)
     
 
  0.903
fumC
Class II fumarate hydratase (466 aa)
     
 
    0.901
Slin_0236
Hypothetical protein (193 aa)
              0.634
Slin_0707
Phosphosulfolactate synthase (254 aa)
 
     
  0.588
Slin_0234
Aldo/keto reductase (328 aa)
              0.504
Slin_4785
Altronate dehydratase (551 aa)
         
  0.465
Slin_0416
Altronate dehydratase (582 aa)
         
  0.465
Slin_4023
Dimethylmenaquinone methyltransferase (198 aa)
 
        0.449
Slin_2911
Malate dehydrogenase (755 aa)
   
   
  0.431
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]