STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0259Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: pnu:Pnuc_0636 cyclic nucleotide-binding protein. (179 aa)    
Predicted Functional Partners:
Slin_0851
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.773
Slin_2881
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.772
Slin_1635
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein.
  
     0.771
Slin_2747
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.771
Slin_3811
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.769
Slin_2727
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_0171 cyclic nucleotide-binding protein.
  
     0.767
Slin_0859
Putative transcriptional regulator, Crp/Fnr family; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.758
Slin_0258
Hypothetical protein.
       0.588
Slin_5021
PFAM: response regulator receiver; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: response regulator receiver; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mxa:MXAN_4049 serine/threonine protein kinase/response regulator/adenylate cyclase.
  
 0.534
Slin_0260
Hypothetical protein.
       0.449
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.