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Slin_0259 protein (Spirosoma linguale) - STRING interaction network
"Slin_0259" - Crp/Fnr family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0259Crp/Fnr family transcriptional regulator (179 aa)    
Predicted Functional Partners:
Slin_3811
Crp/Fnr family transcriptional regulator (197 aa)
   
          0.753
Slin_3257
Hypothetical protein (185 aa)
 
          0.752
Slin_2747
Crp/Fnr family transcriptional regulator (187 aa)
   
          0.749
Slin_2881
Crp/Fnr family transcriptional regulator (187 aa)
   
          0.743
Slin_2093
Crp/Fnr family transcriptional regulator (198 aa)
   
          0.742
Slin_1635
Crp/Fnr family transcriptional regulator (193 aa)
   
          0.740
Slin_0851
Crp/Fnr family transcriptional regulator (199 aa)
   
          0.729
Slin_0859
Crp/Fnr family transcriptional regulator (133 aa)
   
          0.710
Slin_0258
Hypothetical protein (210 aa)
              0.657
Slin_2727
Crp/Fnr family transcriptional regulator (197 aa)
   
          0.638
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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