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Slin_0291 protein (Spirosoma linguale) - STRING interaction network
"Slin_0291" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0291Family 2 glycosyl transferase (312 aa)    
Predicted Functional Partners:
Slin_0290
DegT/DnrJ/EryC1/StrS aminotransferase (376 aa)
   
   
  0.848
Slin_0482
Glycosyl transferase family protein (554 aa)
 
   
  0.820
Slin_0292
CheR-type MCP methyltransferase (253 aa)
 
          0.813
Slin_0289
WxcM domain-containing protein (135 aa)
              0.805
Slin_2951
Glycosyl transferase family protein (322 aa)
   
          0.777
Slin_2546
Family 2 glycosyl transferase (253 aa)
   
          0.687
Slin_6418
Glycosyl transferase family protein (537 aa)
 
   
  0.678
Slin_3525
NAD-dependent epimerase/dehydratase (326 aa)
   
   
  0.648
Slin_4587
Glycosyl transferase family protein (584 aa)
 
   
  0.603
Slin_6090
Hypothetical protein (398 aa)
   
 
  0.571
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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