STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0312Hypothetical protein. (157 aa)    
Predicted Functional Partners:
Slin_0313
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ccs:CCNA_02315 transcriptional regulator, Cro/CI family.
 
     0.917
Slin_0314
PFAM: X-Pro dipeptidyl-peptidase domain protein; peptidase S15; KEGG: mxa:MXAN_3810 CocE/NonD family hydrolase.
 
     0.494
Slin_0953
KEGG: hypothetical protein.
  
     0.452
Slin_0311
PFAM: protein of unknown function DUF718; KEGG: bgl:bglu_1g17970 hypothetical protein.
       0.425
Slin_5705
KEGG: hypothetical protein.
  
     0.419
Slin_5606
PFAM: Spermine synthase; KEGG: afw:Anae109_1825 spermine synthase.
  
     0.411
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.