STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0368TIGRFAM: AMP nucleosidase; PFAM: purine or other phosphorylase family 1; KEGG: bba:Bd1233 AMP nucleosidase. (256 aa)    
Predicted Functional Partners:
Slin_3943
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.923
ade
KEGG: sun:SUN_0856 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
  
  0.917
Slin_5955
KEGG: purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase domain protein; fumarate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.913
Slin_1672
PFAM: deoxynucleoside kinase; KEGG: hypothetical protein.
     
 0.910
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.906
Slin_3262
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: inosine-adenosine-guanosine-nucleoside hydrolase; K01239 purine nucleosidase.
    
 0.906
Slin_5802
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA1874 putative inosine-uridine preferring nucleoside hydrolase.
    
 0.906
Slin_4342
PFAM: metallophosphoesterase; KEGG: similar to 5-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.904
Slin_0264
PFAM: metallophosphoesterase; KEGG: bma:BMA3077 Ser/Thr protein phosphatase family protein.
     
  0.900
Slin_1191
PFAM: metallophosphoesterase; KEGG: bte:BTH_I2835 Ser/Thr protein phosphatase family protein.
     
  0.900
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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