STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0390Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)    
Predicted Functional Partners:
Slin_0391
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: aby:p1ABAYE0005 putative toxin.
 
 
 0.995
Slin_4647
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: aby:p1ABAYE0005 putative toxin.
 
 
 0.979
Slin_5131
KEGG: tdn:Suden_1721 hypothetical protein.
   
 
 0.635
Slin_5434
KEGG: tdn:Suden_1721 hypothetical protein.
   
 
 0.635
Slin_0392
Hypothetical protein.
       0.625
Slin_0389
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_2538 ABC transporter related.
       0.592
Slin_0393
PFAM: OmpA/MotB domain protein; KEGG: mxa:MXAN_5042 OmpA domain-containing protein.
       0.457
Slin_0388
PFAM: Thioredoxin domain; KEGG: AGAP012940-PA.
       0.426
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.