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Slin_0431 protein (Spirosoma linguale) - STRING interaction network
"Slin_0431" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0431Hypothetical protein (341 aa)    
Predicted Functional Partners:
Slin_0108
Hypothetical protein (668 aa)
   
          0.756
Slin_0965
Heme-binding protein (902 aa)
   
          0.745
Slin_1223
G-D-S-L family lipolytic protein (316 aa)
   
          0.744
Slin_3971
Hypothetical protein (595 aa)
   
          0.742
Slin_0535
NIPSNAP family containing protein (267 aa)
   
          0.735
Slin_6339
FG-GAP repeat-containing protein (406 aa)
   
          0.728
Slin_0966
Hypothetical protein (259 aa)
   
          0.724
Slin_0440
RagB/SusD domain-containing protein (561 aa)
   
          0.718
Slin_4377
Lipase (238 aa)
   
          0.702
Slin_3370
Hypothetical protein (263 aa)
   
          0.695
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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