STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0431Hypothetical protein. (341 aa)    
Predicted Functional Partners:
Slin_2319
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: vvu:VV1_0553 glutamate synthase, large subunit.
    
 
 0.892
Slin_0437
PFAM: oxidoreductase domain protein; KEGG: sea:SeAg_B4707 inositol 2-dehydrogenase.
 
     0.756
Slin_3417
Esterase; KEGG: scl:sce5734 esterases.
  
     0.687
Slin_3328
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ara:Arad_2649 hypothetical protein.
  
    0.616
Slin_6339
PFAM: FG-GAP repeat protein; KEGG: scl:sce5734 esterases.
  
     0.612
Slin_0958
PFAM: protein of unknown function DUF1501; KEGG: pat:Patl_0814 twin-arginine translocation pathway signal.
  
     0.601
Slin_0511
TIGRFAM: membrane-bound dehydrogenase domain protein; PFAM: blue (type 1) copper domain protein; KEGG: ara:Arad_4598 hypothetical protein.
  
     0.582
Slin_5622
PFAM: Acetyl xylan esterase; KEGG: yps:YPTB0305 hypothetical protein.
  
     0.578
Slin_0430
Hypothetical protein.
       0.497
Slin_0957
PFAM: protein of unknown function DUF1549; KEGG: pat:Patl_0817 hypothetical protein.
  
     0.484
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.