STRINGSTRING
Slin_0466 protein (Spirosoma linguale) - STRING interaction network
"Slin_0466" - Histidine kinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0466Histidine kinase (422 aa)    
Predicted Functional Partners:
Slin_0465
Transcriptional regulator (225 aa)
 
          0.972
Slin_4553
Transcriptional regulator (227 aa)
 
          0.801
Slin_3454
Transcriptional regulator (223 aa)
 
          0.619
Slin_3951
RagB/SusD domain-containing protein (491 aa)
   
          0.603
Slin_4794
Histidine kinase (454 aa)
   
          0.592
Slin_0920
Histidine kinase (481 aa)
   
          0.577
Slin_3850
Response regulator receiver protein (158 aa)
 
          0.546
Slin_5611
Transcriptional regulator (235 aa)
 
          0.534
Slin_1849
Transcriptional regulator (228 aa)
 
          0.530
Slin_1850
Histidine kinase (458 aa)
   
          0.518
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]