STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0630Hypothetical protein. (204 aa)    
Predicted Functional Partners:
Slin_6454
Hypothetical protein.
  
     0.703
Slin_0230
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
     0.692
Slin_0229
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
     0.687
Slin_3080
PFAM: protein of unknown function DUF490; KEGG: bcs:BCAN_A0050 hypothetical protein.
  
    0.678
Slin_0295
Hypothetical protein.
  
     0.670
Slin_4282
Hypothetical protein.
  
     0.653
Slin_3223
TIGRFAM: gliding motility-associated protein GldM.
  
     0.643
Slin_4388
KEGG: hypothetical protein LOC679314.
  
     0.633
Slin_3226
TIGRFAM: putative membrane protein.
  
     0.632
Slin_6326
Hypothetical protein.
 
     0.628
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.