STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0636PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: cvi:CV_2303 hypothetical protein. (829 aa)    
Predicted Functional Partners:
Slin_0637
Hypothetical protein; KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein.
 
     0.504
Slin_6096
PFAM: protein of unknown function DUF399; KEGG: maq:Maqu_3472 hypothetical protein.
  
     0.464
Slin_2535
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sml:Smlt0603 putative peptidase M14, carboxypeptidase A precursor.
  
     0.438
Slin_4490
KEGG: pat:Patl_1102 hypothetical protein.
  
     0.430
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.