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Slin_0664 protein (Spirosoma linguale) - STRING interaction network
"Slin_0664" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0664Hypothetical protein (185 aa)    
Predicted Functional Partners:
Slin_0665
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase (484 aa)
 
          0.692
Slin_6187
TonB family protein (472 aa)
   
          0.669
Slin_1525
Hypothetical protein (855 aa)
   
          0.653
Slin_4960
Hypothetical protein (296 aa)
   
          0.614
Slin_1252
Cell wall hydrolase/autolysin (347 aa)
   
          0.604
Slin_0663
Hypothetical protein (373 aa)
              0.584
Slin_0301
Hypothetical protein (448 aa)
   
          0.579
Slin_5643
Hypothetical protein (145 aa)
   
          0.575
Slin_6188
TonB family protein (804 aa)
   
          0.558
Slin_1509
Hypothetical protein (172 aa)
   
          0.536
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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