STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0701Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein; KEGG: rpi:Rpic_0704 peroxidase. (211 aa)    
Predicted Functional Partners:
Slin_4346
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.884
Slin_3356
Chitinase; KEGG: hch:HCH_04793 chitinase; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
    
 0.866
hflX
GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
 
      0.828
Slin_2900
PFAM: Catalase related subgroup; Catalase domain protein; KEGG: mch:Mchl_3534 catalase; Belongs to the catalase family.
  
 
 0.655
Slin_3760
Catalase; KEGG: mch:Mchl_3406 catalase.
  
 
 0.655
Slin_6539
Ferritin Dps family protein; Iron-storage protein.
  
  
 0.640
Slin_6098
PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.632
Slin_1610
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: pca:Pcar_1952 negative regulator of ferric uptake; Belongs to the Fur family.
  
  
 0.627
Slin_5541
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: mms:mma_3204 ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.627
Slin_1184
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: rpe:RPE_4614 hypothetical protein.
  
    0.615
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.