STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0708PFAM: thioesterase superfamily protein; KEGG: bbt:BBta_2322 thioesterase superfamily protein. (153 aa)    
Predicted Functional Partners:
Slin_0707
PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: (2r)-phospho-3-sulfolactate synthase; K01767.
 
     0.613
Slin_1796
KEGG: bba:Bd1703 hypothetical protein.
  
     0.475
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.459
Slin_3267
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: swd:Swoo_4518 peptidase S9 prolyl oligopeptidase.
  
     0.446
Slin_0706
PFAM: SNARE associated Golgi protein; KEGG: sdy:SDY_2516 hypothetical protein.
       0.422
Slin_5614
KEGG: dal:Dalk_4949 hypothetical protein.
 
     0.412
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.